Portfolio

  • 2018-now: Contribution to the community terraform-based Cloud Foundry provider. We use mainly Go, and I have contributed to improved application and service support and introduced a better acceptance environment with my students.
  • 2015-2016: Development of OpenChrom, an Eclipse RCP-based solution, to make chromatography and mass spectrometry analysis easier. We use mainly Java, and the open source part is available on GitHub and at Eclipse.
  • 2014 Juni: Teaching materials for the integrated systems biology course at the University of Luxembourg – gave an introduction to “Unix shell”, “Visualization Principles” and “Visualization in R”.
  • 2013 Autumn: A data integration project between the Disease Ontology and the Online Mendelian Inheritance in Man – I established links between the terms of the two databases through text mining to increase the coverage of the Disease Ontology. It was coded in Python and in Perl.
  • 2012-2013: Developed the COMPARTMENTS resource, which is a frequently updated web resource that integrates evidence on protein subcellular localization from manually curated literature, high-throughput screens, automatic text mining, and sequence-based prediction methods – I developed several parts coded in Python and in Perl.
  • 2012 Winter: Created the videos page for VIZBI – VIZBI is one of the largest meeting about the recent developments in visualization in biology. The webpage is search-engine friendly and it fetches the latest videos from Vimeo. It was developed as a combination of JavaScript and PHP.
  • 2010 Spring: Playing with C#. – I was interested changing the SMTP servers in Outlook using the Network Location Awareness feature in Windows. Also I had some experience with the Windows Communication Foundation and with Silverlight.